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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921856.1_cds_XP_016470749.1_63164
CDS Infomation

[gene=LOC107792995] [db_xref=GeneID:107792995] [protein=calcium homeostasis endoplasmic reticulum protein-like] [protein_id=XP_016470749.1] [location=join(89404..90395,92425..92699,92830..93584)] [gbkey=CDS]
Sequence

ATGGATCGACAAGCTCCTGATTATGCAGCTGCTATGGCATTTGCTCAACAGCAGCACCAA
GCAGCAAACACTCAACAGCAACAACAGTTTGGTTTTCATCCTCAACATCAACAATTTCCT
CCTTCAATTCACGGTCCTCCATTTCTAGCCCCGCATTCTTCTCTTCAACAGTTCCCTTAC
CCTCGCCCTATGCAGCAACCACAACTCCATCCTCATACGCCCCCTCCGCATCTTCTTCAC
CTTCAGCAGCAACAGCAACCGCCTCCTGCTTTTCCACCACACATGCCTCCTCACCTTGCT
CCATCACCTTTCTTCAATCCGTATGATACTCCCCCGCCTCCTGCTCCTCCACCATCTGAT
CCTGAACTCCTAAAGCGTATTGATAAATTAATTGAATATGCTGTCAAGAATGGTCCTGAT
TTTGAAGCCATGATTCGTGAAAAGCAGCAAGATAATCCTGCTTACAGTTTCCTCTTTGGC
GGCGAAGGCCATTATTACTATCGCTATAAGCTATGGATGGCTACTCGGCCCCCTGGTGGG
CCTTTCAATCCTTCTTTCCCATCCTCTTCTTTGCCTATGATGCATCCACCAAATCCTATG
ATGAGTCCATCACCCTTAACCCCTCCATATAATGCCTCCAATGCTTCCGCTGCAATGTCA
GGTCCACCCCATTTGCATCGACCCCCTTTCCCACCATTTTATGATCAGCATCACTCTCAG
CCATTTAGCCGAGCAGATCATGATCATTCATATGGGTCTTTCAGAGGTCTATCTAGGCCT
CTTCCATCAGATGTTGAAATGGAGCTGAGTAATGTTCTAAATAGTCTTACTGGTACAAAA
GAGTCAATTAAAGGTGCCAAGAGTTGGTTTATGCAGAGATCTCCATTTGTACCTGCTTTG
GCTGAGGCACTCAGAGACAGGGTATATTCTGTAGATGATTCTGAGAGGCAACTGCATATA
ATCTATCTTGCCAATGACATCTTATTTGATAGCTTGCAGCGACGAATCAATCCTCTTGAG
CTTGACAATGAGGCACTTGCTTTTAAGCCTGTTTTGGGTCCCATGCTTGCAAGAATATAC
CACAACCCTCAAAACAAGGATGAAAATCAATCTCGGCTACAAAAAATTCTACAGTTTTGG
GGTACGAAGGAGGTTTACGATCAGGATACTATCCGTGCACTTGAAAATGAGATGATAGGT
GGGCAGCCTGCAAATTTTTCTGTTACTCCAAAGGAATTAATCATGACAGATCCTTCTGCT
GGTGCAGGATTAATGCACCAGGCAGCAAACCAGGGTACTTTACAGTGGAAGCCTGACCAG
CAAAGTTTAGCAAATTTAGCTGATCAAGGCAAACAAGTTCCTCCTATACCATCTGTAGCA
CCACAGCAATTTCATCCTGGTGCAGTTCCGCCTACTGGATTTCCCGGGTCAATGCCTGTA
CCATCTTCTGTTCCACCAGCAAATCTACAACCTGCAGCTCATCTGACACCTGCATCAACT
GCAAATGTAGGTGCAAAACTACCTCCATACCCCTTGTTCCCTCCTGGTCTTATTCCTGGT
ATGGTCAGGAAGATGCAGATTGGTAGTGGGGTGCCTTACTCTCCCATGAGCCCCTTGGAT
ATCCCCACCATCGTACCACCATCCACTGTGTCAGAATCTGAAATTCTTGAAAGAGTGTCT
AAATTTTTTAAAGAGATTGGAGAAGTTAATCCATCAGAAGGACCTATTAAACAATCTGAT
TCAGCCAATGATTATGATGACTATGAGAGAGAGCCTCCTGTTCGCAAGGGAGGGGCTTGT
ATTCCTCCCCCTCCTAACCTTCAAGTTGACCCTGAAACTGGGACTTATGCTGATGGAAGT
GTGGTGCAGAAACCTGGATCGAATAGCTCAGGGCGATTAGGACTTGGAGCCACTGCTGAT
CCAAACGAGTGTAGTCAATATGATGACGTTTACACTTCTTACCGGAAAGAGAGAAGCACC
AATTATCATTCATCAATGAGTGTAAGAACTGCTGCGAGGTAA

Peptide Sequence

PEP ID

XP_016470749.1
PEP Infomation

PREDICTED: calcium homeostasis endoplasmic reticulum protein-like [Nicotiana tabacum]
Sequence

MDRQAPDYAAAMAFAQQQHQAANTQQQQQFGFHPQHQQFPPSIHGPPFLAPHSSLQQFPY
PRPMQQPQLHPHTPPPHLLHLQQQQQPPPAFPPHMPPHLAPSPFFNPYDTPPPPAPPPSD
PELLKRIDKLIEYAVKNGPDFEAMIREKQQDNPAYSFLFGGEGHYYYRYKLWMATRPPGG
PFNPSFPSSSLPMMHPPNPMMSPSPLTPPYNASNASAAMSGPPHLHRPPFPPFYDQHHSQ
PFSRADHDHSYGSFRGLSRPLPSDVEMELSNVLNSLTGTKESIKGAKSWFMQRSPFVPAL
AEALRDRVYSVDDSERQLHIIYLANDILFDSLQRRINPLELDNEALAFKPVLGPMLARIY
HNPQNKDENQSRLQKILQFWGTKEVYDQDTIRALENEMIGGQPANFSVTPKELIMTDPSA
GAGLMHQAANQGTLQWKPDQQSLANLADQGKQVPPIPSVAPQQFHPGAVPPTGFPGSMPV
PSSVPPANLQPAAHLTPASTANVGAKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLD
IPTIVPPSTVSESEILERVSKFFKEIGEVNPSEGPIKQSDSANDYDDYEREPPVRKGGAC
IPPPPNLQVDPETGTYADGSVVQKPGSNSSGRLGLGATADPNECSQYDDVYTSYRKERST
NYHSSMSVRTAAR

Transcript Sequence

Gene sequence data has not been registered.